Benjamin Lee

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Articles

Antibodies | Free Full-Text | The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Sep 10, 2024 | mdpi.com | Ben Niu |Benjamin Lee |Lili Wang |Wen Chen

All articles published by MDPI are made immediately available worldwide under an open access license. No special permission is required to reuse all or part of the article published by MDPI, including figures and tables. For articles published under an open access Creative Common CC BY license, any part of the article may be reused without permission provided that the original article is clearly cited. For more information, please refer to https://www.mdpi.com/openaccess.
Why I Use Nim Instead of Python for Data Processing

Sep 6, 2024 | benjamindlee.com | Benjamin Lee

Lazy programmers often prefer to substitute computing effort for programming effort. I am just such a programmer. For my research, I often need to design and run algorithms over large datasets ranging into the scale of terabytes. As a fellow at the NIH, I have access to Biowulf, a 100,000+ processor cluster, so it’s usually not worth spending a ton of time optimizing single-threaded performance for a single experiment when I can just perform a big MapReduce.
Tissue Rings PLOD Out a Second Hit in Becker Muscular Dystrophy

Jul 10, 2023 | pubmed.ncbi.nlm.nih.gov | Lee BW |Benjamin Lee |Kenneth B. Margulies |Margulies KB

Save citation to file Format: Add to My Bibliography Your saved search Name of saved search: Search terms: Frequency: Which day? Which day? Report format: Send at most: Send even when there aren't any new results Optional text in email: Create a file for external citation management software
Integrating Community Ecology into Models of Vector-Borne Virus Transmission

Jun 15, 2023 | mdpi.com | Benjamin Lee |David Crowder |Liesl C. Oeller

Abstract:Vector-borne plant viruses are a diverse and dynamic threat to agriculture with hundreds of economically damaging viruses and insect vector species. Mathematical models have greatly increased our understanding of how alterations of vector life history and host–vector–pathogen interactions can affect virus transmission.
Tissue Rings PLOD Out a Second Hit in Becker Muscular Dystrophy∗ :

Jun 1, 2023 | jacc.org | Benjamin Lee |Kenneth B. Margulies

JACC Journals › JACC: BTS › Archives › Vol. 8 No. 6 IntroductionDuchenne muscular dystrophy (DMD) and Becker muscular dystrophy (BMD), together called the dystrophinopathies, are a group of X-linked recessive disorders leading to weakness, muscle wasting, and premature death.