Swagatam Chakraborti

Oct 17, 2024 | biorxiv.org | Namrata Bhattacharya |Krishan Lal Gupta |Aayushi Mittal |Swagatam Chakraborti

AbstractThe complexity of scRNA-sequencing datasets highlights the urgent need for enhanced clustering and visualization methods. Here, we propose Stardust, an iterative, force-directed graph layouting algorithm that enables simultaneous embedding of cells and marker genes. Stardust, for the first time, allows a single stop visualization of cells and marker genes as part of a single 2D map.