Xingyu Liao

Apr 30, 2024 | mdpi.com | Xingyu Liao |Xiaoping Liu

This is an early access version, the complete PDF, HTML, and XML versions will be available soon. Open AccessArticlebyXingyu LiaoXingyu LiaoScilitPreprints.orgGoogle Scholar and Xiaoping LiuXiaoping LiuScilitPreprints.orgGoogle Scholar * Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China*Author to whom correspondence should be addressed.

Aug 20, 2023 | biorxiv.org | Xingyu Liao |Juexiao Zhou |Bin Zhang |Xingyi Li

AbstractIdentification of tandem repeat (TR) variations plays a crucial role in advancing our understanding of genetic diseases, forensic analysis, evolutionary studies, and crop improvement, thereby contributing to various fields of research and practical applications. However, traditional TR identification methods are often limited to processing genomes obtained through sequence assembly and cannot directly start detection from sequencing reads.

Jun 30, 2023 | frontiersin.org | Min Zeng |Junwei Luo |Xingyu Liao

Lisa Fiedler1* Martin Middendorf1† Matthias Bernt2†1Department of Computer Science, Leipzig University, Leipzig, Germany2Helmholtz Centre for Environmental Research—UFZ, Leipzig, GermanyA wide range of scientific fields, such as forensics, anthropology, medicine, and molecular evolution, benefits from the analysis of mitogenomic data. With the development of new sequencing technologies, the amount of mitochondrial sequence data to be analyzed has increased exponentially over the last few years.