Yasset Perez-Riverol

Sep 11, 2024 | jbt.pubpub.org | Benjamin Neely |Yasset Perez-Riverol |Magnus Palmblad

The past decade has seen widespread advances in quality control (QC) materials and software tools focused specifically on mass spectrometry–based proteomics, yet the rate of adoption is inconsistent. Despite the fundamental importance of QC, it typically falls behind learning new techniques, instruments, or software.

Mar 26, 2024 | zenodo.org | Matthew Monroe |Yasset Perez-Riverol |Christopher Wilkins |Dennis Goldfarb |Jonghun Park |Matt Chambers | +2 more

Published March 27, 2024 | Version v2024.03.26 Software Open MS-GF+ performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence database. Name Size md5:9bff8b7876d84b9601f5f4b37a8960da 125.1 MB Software: https://github.com/MSGFPlus/msgfplus/tree/v2024.03.26 (URL)

Jan 22, 2024 | nature.com | Henry E. Webel |Yasset Perez-Riverol

AbstractHere we provide a curated, large scale, label free mass spectrometry-based proteomics data set derived from HeLa cell lines for general purpose machine learning and analysis. Data access and filtering is a tedious task, which takes up considerable amounts of time for researchers. Therefore we provide machine based metadata for easy selection and overview along the 7,444 raw files and MaxQuant search output.