Canh Hao

Jul 22, 2024 | bmcgenomics.biomedcentral.com | Duc quang |Tam Thi |Canh Hao |Tho Huu

To the best of our knowledge, at the time of writing, there are four existing open source software pipelines for end to end microbial genomics analysis, namely Nullarbor [17], TORMES [37], ASA3P [19] and Bactopia [18]. While AMRomics and these software tools share the overall functionalities, they differ in the underlying philosophies. Here, we present a high level discussion of AMRomics features and highlight the principles behind the design of AMRomics.

May 15, 2024 | bmcbioinformatics.biomedcentral.com | Duc quang |Son Hoang |Tam Thi |Canh Hao

References Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, Angiuoli SV, Crabtree J, Jones AL, Durkin AS, DeBoy RT, Davidsen TM, Mora M, Scarselli M, Margarit y Ros I, Peterson JD, Hauser CR, Sundaram JP, Nelson WC, Madupu R, Brinkac LM, Dodson RJ, Rosovitz MJ, Sullivan SA, Daugherty SC, Haft DH, Selengut J, Gwinn M.L, Zhou L, Zafar N, Khouri H, Radune D, Dimitrov G, Watkins K, O’Connor KJB, Smith S, Utterback TR, White O, Rubens CE, Grandi G, Madoff LC, Kasper DL, Telford...