Tho Huu

Jul 22, 2024 | bmcgenomics.biomedcentral.com | Duc quang |Tam Thi |Canh Hao |Tho Huu

To the best of our knowledge, at the time of writing, there are four existing open source software pipelines for end to end microbial genomics analysis, namely Nullarbor [17], TORMES [37], ASA3P [19] and Bactopia [18]. While AMRomics and these software tools share the overall functionalities, they differ in the underlying philosophies. Here, we present a high level discussion of AMRomics features and highlight the principles behind the design of AMRomics.