Tam Thi

Aug 6, 2024 | genomebiology.biomedcentral.com | Duc quang |Tien Ngo Anh |Son Hoang |Tam Thi

PanTA is developed with the aim to build the pangenome of a large collection of genomes and to add a set of new genomes to an existing pangenome without rebuilding the accumulated pangenome from scratch. The workflow of PanTA pipeline is summarized in Fig. 1. PanTA takes as input a list of genome assemblies and their annotations. PanTA then extracts the protein coding regions as specified by the annotation, and translates them to protein sequences.

Jul 22, 2024 | bmcgenomics.biomedcentral.com | Duc quang |Tam Thi |Canh Hao |Tho Huu

To the best of our knowledge, at the time of writing, there are four existing open source software pipelines for end to end microbial genomics analysis, namely Nullarbor [17], TORMES [37], ASA3P [19] and Bactopia [18]. While AMRomics and these software tools share the overall functionalities, they differ in the underlying philosophies. Here, we present a high level discussion of AMRomics features and highlight the principles behind the design of AMRomics.

May 15, 2024 | bmcbioinformatics.biomedcentral.com | Duc quang |Son Hoang |Tam Thi |Canh Hao

References Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, Angiuoli SV, Crabtree J, Jones AL, Durkin AS, DeBoy RT, Davidsen TM, Mora M, Scarselli M, Margarit y Ros I, Peterson JD, Hauser CR, Sundaram JP, Nelson WC, Madupu R, Brinkac LM, Dodson RJ, Rosovitz MJ, Sullivan SA, Daugherty SC, Haft DH, Selengut J, Gwinn M.L, Zhou L, Zafar N, Khouri H, Radune D, Dimitrov G, Watkins K, O’Connor KJB, Smith S, Utterback TR, White O, Rubens CE, Grandi G, Madoff LC, Kasper DL, Telford...

Jan 2, 2024 | avpn.asia | Tam Thi |Wyrlo Agsalud

5 minutes readThe word mindset was first used at the turn of the twentieth century to describe habits of mind formed by previous experience (Gollwitzer, 1990)[1]. Mindsets are associated with the unfolding of human potential in two primary directions, namely fixed mindset and growth mindset[2]. Learning through Play (LtP) is an educational approach which helps teachers to develop their growth mindset.