Pierre V. Baudin

Oct 27, 2023 | zenodo.org | Alex Spaeth |David Parks |Pierre V. Baudin |Matthew Elliott |Rob Currie |Kateryna Voitiuk | +7 more

Published October 27, 2023 | Version v0.1.0 Software Open What's ChangedAdded concatenate method, fixed fatal error in subset(), and fixed issue with neuron_attributes being empty when reading from phys data by @MissValeska in https://github.com/braingeneers/braingeneerspy/pull/7Fix, moved experiment to metadata instead of NeuronAttributes by @ashsrobbins in https://github.com/braingeneers/braingeneerspy/pull/11The most basic possible test for read_phy_files().

Sep 14, 2023 | paperity.org | Pierre V. Baudin |Mircea Teodorescu

PLOS ONE, Sep 2023 For a transparent well with a known volume capacity, changes in fluid level result in predictable changes in magnification of an overhead light source. For a given well size and fluid, the relationship between volume and magnification can be calculated if the fluid’s index of refraction is known or in a naive fashion with a calibration procedure. Light source magnification can be measured through a camera and processed using computer vision contour analysis with OpenCV.