Alex K. Shalek

Mar 11, 2025 | cell.com | Alan DenAdel |Michelle L. Ramseier |Andrew W. Navia |Alex K. Shalek |Srivatsan V. Raghavan |Peter Winter | +1 more

Keywordsclusteringdouble dippingsingle celldifferential expression analysiscalibrationmachine learningGet full text accessLog in, subscribe or purchase for full access. References1. Zheng, G.X.Y. ∙ Terry, J.M. ∙ Belgrader, P. ... Massively parallel digital transcriptional profiling of single cellsNat. Commun. 2017; 8, 140492. Macosko, E.Z. ∙ Basu, A. ∙ Satija, R. ... Highly parallel genome-wide expression profiling of individual cells using nanoliter dropletsCell. 2015; 161:1202-12143. Stoeckius, M.

Jan 15, 2025 | cell.com | Joshua Bromley |Sarah K. Nyquist |Pauline Maiello |Michael C. Chao |H. Jacob Borish |Mark Rodgers | +16 more

Main text(Immunity 57, 2380–2398.e1–e6; October 8, 2024)Following publication, we, the authors, identified three inadvertent errors. First, we realized that the data from the naive macaque control animals, specifically Mtb CFU and barcoding and PET-CT data, were previously published (see reference 9, Ganchua et al., in the references list). These macaques were originally part of the present study but were used as controls for another similar study that was submitted at the same time.

Aug 18, 2024 | nature.com | Konstantine Tchourine |Keene L. Abbott |Florian Gourgue |Brian T. Do |Tenzin Kunchok |Allison Lau | +9 more

AbstractMetastases arise from subsets of cancer cells that disseminate from the primary tumour1,2. The ability of cancer cells to thrive in a new tissue site is influenced by genetic and epigenetic changes that are important for disease initiation and progression, but these factors alone do not predict if and where cancers metastasize3,4. Specific cancer types metastasize to consistent subsets of tissues, suggesting that primary tumour-associated factors influence where cancers can grow.