-
2 months ago | 
nature.com | Yuyao Liu |Zhen Li |Xiaoyang Chen |Xuejian Cui |Zijing Gao
AbstractRecent advances in spatial epigenomic techniques have given rise to spatial assay for transposase-accessible chromatin using sequencing (spATAC-seq) data, enabling the characterization of epigenomic heterogeneity and spatial information simultaneously.
-
Jan 17, 2025 | 
biorxiv.org | Zhen Li |Xuejian Cui |Xiaoyang Chen |Zijing Gao
AbstractSpatially resolved sequencing technologies have revolutionized our understanding of biological regulatory processes within the microenvironment by accessing the states of genomic regions, genes and proteins as well as spatial coordinates of cells. However, discrepancies between different modalities and samples hinder the analysis of spatial omics data, necessitating the development of advanced computational methods.
-
Dec 30, 2024 | 
genomebiology.biomedcentral.com | Xiaoyang Chen |Keyi LI |Xiaoqing Wu |Zhen Li |Qun Jiang |Xuejian Cui | +3 more
To capture spatial accessibility pattern of each peak, Descart construct a spatial graph based on spatial locations of spots (can also be replaced by cells).
-
Dec 11, 2024 | 
biorxiv.org | Hao Zheng |Xiaoyang Chen |Hongming Li |Tingting Chen
AbstractDeep learning-based cortical surface reconstruction (CSR) methods heavily rely on pseudo ground truth (pGT) generated by conventional CSR pipelines as supervision, leading to dataset-specific challenges and lengthy training data preparation. We propose a new approach for reconstructing multiple cortical surfaces using weak supervision from brain MRI ribbon segmentations.
-
Dec 10, 2024 | 
mdpi.com | Susan DeLay |Xiaoyang Chen |Jason Miska |Yuheng Geng
All articles published by MDPI are made immediately available worldwide under an open access license. No special permission is required to reuse all or part of the article published by MDPI, including figures and tables. For articles published under an open access Creative Common CC BY license, any part of the article may be reused without permission provided that the original article is clearly cited. For more information, please refer to https://www.mdpi.com/openaccess.
-
Dec 6, 2024 | 
mdpi.com | Tao Yang |Yajun Wang |Yang Bai |Xiaoyang Chen
1. IntroductionWith the rapid consumption of global resources, the widespread use of cement-based materials poses a serious challenge to the sustainability of natural resources. Excessive reliance on traditional natural mineral raw materials not only accelerates resource depletion but also triggers a series of environmental issues, including ecological damage from mineral extraction and increased carbon emissions [1].
-
Dec 5, 2024 | 00387-3&sz=64)
cell.com | Qiutao Xu |Xuan Ma |Zhengting Chen |Yuhang Duan |Zhaoyun Wang |JING CHEN | +7 more
State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China
-
Nov 20, 2024 | 
mdpi.com | Yang Bai |Yajun Wang |Tao Yang |Xiaoyang Chen
All articles published by MDPI are made immediately available worldwide under an open access license. No special permission is required to reuse all or part of the article published by MDPI, including figures and tables. For articles published under an open access Creative Common CC BY license, any part of the article may be reused without permission provided that the original article is clearly cited. For more information, please refer to https://www.mdpi.com/openaccess.
-
Nov 12, 2024 | 
mdpi.com | Xiaoyang Chen |Yajun Wang |Tao Yang |Yang Bai
All articles published by MDPI are made immediately available worldwide under an open access license. No special permission is required to reuse all or part of the article published by MDPI, including figures and tables. For articles published under an open access Creative Common CC BY license, any part of the article may be reused without permission provided that the original article is clearly cited. For more information, please refer to https://www.mdpi.com/openaccess.
-
Nov 6, 2024 | 
nature.com | Xiaoyang Chen |Zhicheng Jiang |Kun Jiang |Stefano Agrestini |Mirian García-Fernández |Dawei Shen | +4 more
AbstractHigh-temperature superconductivity was discovered in the pressurized nickelate La3Ni2O7 which has a unique bilayer structure and mixed valence state of nickel. The properties at ambient pressure contain crucial information of the fundamental interactions and bosons mediating superconducting pairing.
