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Jan 21, 2025 | 
biorxiv.org | Yunlong Li |Xu Liu |Chong Chen |Jian-Wen Qiu
AbstractPhylogenomics has emerged as a transformative approach in systematics, conservation biology, and biomedicine, enabling the inference of evolutionary relationships by leveraging hundreds to thousands of genes from genomic or transcriptomic data. However, acquiring high-quality genomes and transcriptomes necessitates samples with intact DNA and RNA, substantial sequencing investments, and extensive bioinformatic processing, such as genome/transcriptome assembly and annotation.
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Nov 11, 2024 | 
onlinelibrary.wiley.com | Bo Wang |Mingda Chen |Chong Chen |Jinkang Wei
References 1, Cambridge University Study States Software Bugs Cost Economy $312 Billion per Year (Cambridge, UK: Cambridge University, 2013). 2, , , et al., “Deep Learning-Based Software Engineering: Progress, Challenges, And Opportunities,” Science China Information Sciences (2024), https://doi.org/10.1007/s11432-023-4127-5. 3, , and , “A Quantitative and Qualitative Evaluation of LLM-Based Explainable Fault Localization,” Proceedings of the ACM on Software Engineering 1, no.
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Sep 28, 2024 | 
nature.com | Yi-Fei Li |Yu Chi Liu |Chong Chen |Lu Chen |Xiangfeng Wang |Yi Liu
AbstractRNA-binding proteins (RBPs) modulate all aspects of RNA metabolism, but a comprehensive picture of RBP expression across tissues is lacking. Here, we describe our development of the method we call HARD-AP that robustly retrieves RBPs and tightly associated RNA regulatory complexes from cultured cells and fresh tissues. We successfully use HARD-AP to establish a comprehensive atlas of RBPs across mouse primary organs.
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Jul 25, 2024 | 
biorxiv.org | Yunlong Li |Xu Liu |Chong Chen |Jian-Wen Qiu
AbstractPhylogenomics has become a prominent method in systematics, conservation biology, and biomedicine, as it can leverage hundreds to thousands of genes derived from genomic or transcriptomic data to infer evolutionary relationships. However, obtaining high-quality genomes and transcriptomes requires samples preserved with high-quality DNA and RNA and demands considerable sequencing costs and lofty bioinformatic efforts (e.g., genome/transcriptome assembly and annotation).
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Mar 14, 2024 | 
mdpi.com | Wei Chen |Yi Han |Jie Zhao |Chong Chen
All articles published by MDPI are made immediately available worldwide under an open access license. No specialpermission is required to reuse all or part of the article published by MDPI, including figures and tables. Forarticles published under an open access Creative Common CC BY license, any part of the article may be reused withoutpermission provided that the original article is clearly cited. For more information, please refer tohttps://www.mdpi.com/openaccess.
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Feb 20, 2024 | 
onlinelibrary.wiley.com | Yichi Zhang |Hua Bai |Chong Chen |Yongjian Zhou
Conflict of Interest The authors declare no conflict of interest. Supporting Information Filename Description adfm202313332-sup-0001-SuppMat.pdf1.3 MB Supporting Information References 1, , , , , , , , Science 2001, 294, 1488. 2, , , , , , Sci. Adv. 2017, 3, 1602429. 3, , , , Science 2004, 306, 1910. 4, , , , Appl. Phys. Lett. 2006, 88, 182509. 5, , , , , Nat. Phys. 2015, 11, 1022. 6, , , , , , , , , Nature 2018, 561, 222. 7, , , , , , , , , , , , , , Sci. Adv.
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Feb 20, 2024 | 
pericles.pericles-prod.literatumonline.com | Yichi Zhang |Hua Bai |Chong Chen |Yongjian Zhou
Conflict of Interest The authors declare no conflict of interest. Supporting Information Filename Description adfm202313332-sup-0001-SuppMat.pdf1.3 MB Supporting Information References 1, , , , , , , , Science 2001, 294, 1488. 2, , , , , , Sci. Adv. 2017, 3, 1602429. 3, , , , Science 2004, 306, 1910. 4, , , , Appl. Phys. Lett. 2006, 88, 182509. 5, , , , , Nat. Phys. 2015, 11, 1022. 6, , , , , , , , , Nature 2018, 561, 222. 7, , , , , , , , , , , , , , Sci. Adv.
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Jan 26, 2024 | 
science.org | Rui Peng |Yuriko N. Koyanagi |Clémentine Eva Philibert |Seunghyun Moon |Xizhi Fu |Yichi Zhang | +15 more
Research Article PHYSICS Lei Han https://orcid.org/0000-0001-6152-0307, Xizhi Fu, [...] , Rui Peng, Xingkai Cheng, [...] , Jiankun Dai, Liangyang Liu https://orcid.org/0000-0003-0943-5468, Yidian Li, Yichi Zhang, Wenxuan Zhu, [...] , Hua Bai https://orcid.org/0000-0002-4853-4349, Yongjian Zhou https://orcid.org/0000-0003-4275-8234, Shixuan Liang, Chong Chen, Qian Wang, Xianzhe Chen https://orcid.org/0000-0002-8079-8838, Luyi Yang https://orcid.org/0000-0001-6260-1395, Yang Zhang...
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Nov 13, 2023 | 
biorxiv.org | Chong Chen |John Jamieson |Japan Agency
AbstractMonoplacophoran molluscs have been dubbed "living fossils" due to their absence in the fossil record for about 375 million years, until Neopilina galatheae Lemche, 1957 was trawled off Costa Rica in 1952. Since then, over 35 species of living monoplacophorans have been discovered. Nevertheless, in situ observations of these rare deep-sea animals remain scant. Here, we observed and collected an intact specimen of N.
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Sep 26, 2023 | 
link.aps.org | Wenxuan Zhu |Hua Bai |Chong Chen |Feng Pan
Enhancement of the Curie temperature (TC) has always been a vital problem since the discovery of two-dimensional (2D) van der Waals (vdW) magnets. The interfacial effect from layers with strong spin-orbit coupling (SOC) has been widely investigated to be an effective method. Here, we experimentally show that TC of vdW CrPS4 is enhanced from 40 K up to room temperature by the interfacial effect from graphene with weak SOC.
